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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940899.1_cds_XP_016484979.1_75947
CDS Infomation

[gene=LOC107805445] [db_xref=GeneID:107805445] [protein=E3 ubiquitin-protein ligase RING1-like] [protein_id=XP_016484979.1] [location=complement(11318..12394)] [gbkey=CDS]
Sequence

ATGGCTATGAACACCAGAAAACTACTTCAAACTGCAAATCAATCCAAAGATTGTTTGTAT
TTTTGTGATTCAACATGTCCTGATAGTTGTTATCCATATGTAGACTTGGATTATTACACA
CCACCACCACCACCTCCGCCGCTGCCGCCGCCACAATTAAGTAGCAAACATCATCAGAAT
ATATCACCTTATATTATCATCTCTGTTGCCTTATTTGCTAGCTTGTTTCTTCTTGTTAGC
TACTATTTGATCATTGTTAAGAACTGCTTGAATTGGAACAGAAGAAGAAGTACCTCAGCA
CAAGGCTCCAATGAAGAATTTTTCGACGAAAATCGAGCTCCTATAATTGATCATCCAATT
TGGTACATCAACACTGTGGGTCTTCAACCATCTGTTATTGATATGATAACTATTTTCAAG
TTCAAAAAAGGGGATGGTCTGATTGAAGGAACAAACTGCTCTGTTTGCTTGAATGAATTT
CAAGAAGAGGAGTCTCTTAGACTACTTCCAAATTGTAAACATGCTTTTCACATCCATTGT
ATTGACACATGGCTTAGATCACACACCAATTGTCCCTTGTGTCGTGCTTCTATCGAGCCG
AATTTAGGTACTAGTTTCAGTACCAATGAAGAAAGGATGTTGGAAATTGATGAACAGAGA
GATGATACTGGAGAAGTAAATAGTAACAATGAGGCCACAGATGGCGAGATTTGCGAAAAT
GCTGGTGAGCAAGAAGAGTTTTTGCAGATTGAGAGCCTGGGAACTTCAGCAAAAAAAGTT
AATACCAAATGGGATAGTGTAAATGGAGAGGTACAAGGAATGAGGAGGTCTGTTTCAGTA
GATTCTTCAATTAGTTTAAATATAGGACTTGGTATGTATATGTTGTCAAGAATGAGTAGA
GGTGAAAAGGGATGTGTTGAAACAGCAAAACTGGAGGAAGCTGTTGGTGAAAATTCAAGT
TCCATGGCATTGTCTCTGCATAAAGAACATGTTTTGATGAAGAGATCATTTTCATATGGT
GGTAGGTCTTTCTTCTCAAGACATCATCGTAGCTCCAGTTCAGTACTTCCATTGTGA

Peptide Sequence

PEP ID

XP_016484979.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RING1-like [Nicotiana tabacum]
Sequence

MAMNTRKLLQTANQSKDCLYFCDSTCPDSCYPYVDLDYYTPPPPPPPLPPPQLSSKHHQN
ISPYIIISVALFASLFLLVSYYLIIVKNCLNWNRRRSTSAQGSNEEFFDENRAPIIDHPI
WYINTVGLQPSVIDMITIFKFKKGDGLIEGTNCSVCLNEFQEEESLRLLPNCKHAFHIHC
IDTWLRSHTNCPLCRASIEPNLGTSFSTNEERMLEIDEQRDDTGEVNSNNEATDGEICEN
AGEQEEFLQIESLGTSAKKVNTKWDSVNGEVQGMRRSVSVDSSISLNIGLGMYMLSRMSR
GEKGCVETAKLEEAVGENSSSMALSLHKEHVLMKRSFSYGGRSFFSRHHRSSSSVLPL

Transcript Sequence

Gene sequence data has not been registered.